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Jesse Heckman
pbtoolbox
Commits
1424b8fb
Commit
1424b8fb
authored
Mar 22, 2019
by
Jesse Heckman
Browse files
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Update vPRIME Draft
parent
333d9975
Changes
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12 changed files
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128 additions
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53 deletions
+128
-53
setups/vestibular chair/vPrime/tdt/rcx/Maxtrix values for the State Machine.docx
.../vPrime/tdt/rcx/Maxtrix values for the State Machine.docx
+0
-0
setups/vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test.m
setups/vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test.m
+0
-29
setups/vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test2.rcx
.../vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test2.rcx
+0
-0
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6 new.rcx
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6 new.rcx
+0
-0
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6.rcx
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6.rcx
+0
-0
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6_tmp.rcx
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6_tmp.rcx
+0
-0
subtools/draft/@pb_draft/draft.m
subtools/draft/@pb_draft/draft.m
+13
-13
subtools/draft/@pb_draft/private/make_axes.m
subtools/draft/@pb_draft/private/make_axes.m
+44
-8
subtools/draft/@pb_draft/private/make_suplabel.m
subtools/draft/@pb_draft/private/make_suplabel.m
+1
-1
subtools/draft/example_draft.m
subtools/draft/example_draft.m
+2
-2
subtools/draft/example_draft2.m
subtools/draft/example_draft2.m
+23
-0
utilities/housekeeping/pb_figure.m
utilities/housekeeping/pb_figure.m
+45
-0
No files found.
setups/vestibular chair/vPrime/tdt/rcx/Maxtrix values for the State Machine.docx
deleted
100644 → 0
View file @
333d9975
File deleted
setups/vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test.m
deleted
100644 → 0
View file @
333d9975
a1
=
[
0
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
];
a2
=
[
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
21
];
a3
=
[
0
1
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
];
a4
=
[
0
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
];
a5
=
[
0
0
1
1
2
2
3
3
4
4
5
5
6
6
7
7
8
8
9
9
10
9
];
a6
=
[
0
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
];
a7
=
[
0
0
0
0
1
1
2
2
3
3
4
4
5
5
6
6
7
7
8
8
9
9
];
a8
=
[
0
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
3
2
];
A
=
[
a1
;
a2
;
a3
;
a4
;
a5
;
a6
;
a7
;
a8
];
%Connects to RZ6 #1 via Optical Gigabit
RP
=
actxcontrol
(
'RPco.x'
,[
5
5
26
26
]);
if
RP
.
ConnectRZ6
(
'GB'
,
1
)
e
=
'connected'
else
e
=
'Unable to connect'
end
RP
.
LoadCOF
(
'U:\##BIOFYSICA\#P075 Moving sound\SetTagV_Matrix_test2.rcx'
);
RP
.
Run
;
if
RP
.
WriteTagVEX
(
'STM_Data'
,
0
,
'F32'
,
A
)
e
=
'WriteTagVEX OK'
else
e
=
'WriteTagVEX error'
end
Matrix
=
RP
.
ReadTagVEX
(
'STM_Data'
,
0
,
22
,
'F32'
,
'F64'
,
8
)
setups/vestibular chair/vPrime/tdt/rcx/SetTagV_Matrix_test2.rcx
deleted
100644 → 0
View file @
333d9975
File deleted
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6 new.rcx
deleted
100644 → 0
View file @
333d9975
File deleted
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6.rcx
View file @
1424b8fb
No preview for this file type
setups/vestibular chair/vPrime/tdt/rcx/vPrime_RZ6_tmp.rcx
deleted
100644 → 0
View file @
333d9975
File deleted
subtools/draft/@pb_draft/draft.m
View file @
1424b8fb
...
...
@@ -33,18 +33,18 @@ function draft(obj)
%% Set Compare Axis
% Check and set comparing axis
ax
=
gobjects
(
0
);
objsz
=
size
(
obj
);
nCmp
=
length
(
unique
(
obj
(
1
)
.
pva
.
axcomp
.
feature
));
if
min
(
objsz
)
>
1
;
nCmp
=
1
;
end
cmpsz
=
[
1
1
];
[
~
,
cmpInd
]
=
max
(
cmpsz
);
cmpsz
(
cmpInd
)
=
nCmp
;
cmpsz
=
fliplr
(
cmpsz
);
obj
(
1
)
.
h_ax_plot
.
sz
=
cmpsz
.*
size
(
obj
);
%
ax = gobjects(0);
%
objsz = size(obj);
%
%
nCmp = length(unique(obj(1).pva.axcomp.feature));
%
if min(objsz) > 1; nCmp = 1; end
%
%
cmpsz = [1 1];
%
[~,cmpInd] = max(cmpsz);
%
cmpsz(cmpInd) = nCmp;
%
cmpsz = fliplr(cmpsz);
%
%
obj(1).h_ax_plot.sz = cmpsz .* size(obj);
%% Create Plots
% Draft each subplot
...
...
@@ -57,7 +57,7 @@ function draft(obj)
% Make Axes
Ax
=
pb_invidx
(
objsz
.*
cmpsz
,
cObj
);
% reverse get axes index
Ax2Obj
=
pb_invidx
(
objsz
,
iObj
);
% reverse get object index
ax
(
Ax
)
=
subplot
(
objsz
(
1
)
*
cmpsz
(
1
),
objsz
(
2
)
*
cmpsz
(
2
),
cObj
);
% make axis
%
ax(Ax) = subplot(objsz(1)*cmpsz(1),objsz(2)*cmpsz(2),cObj); % make axis
if
obj
(
iObj
)
.
pva
.
subtitle
;
title
(
obj
(
Ax2Obj
)
.
pva
.
subtitle
);
end
axis
(
obj
(
Ax2Obj
)
.
pva
.
axis
);
...
...
subtools/draft/@pb_draft/private/make_axes.m
View file @
1424b8fb
...
...
@@ -28,7 +28,8 @@ function make_axes(obj,varargin)
%% Build Playground
% Set graphing axes
h
=
gobjects
(
ngraph
,
1
);
h
=
gobjects
(
ngraph
,
1
);
pos
=
axis_pos
(
obj
,
graphsz
,
playground
);
% h = pb_fobj(gcf,'Tag','legend');
% scale = [h.Position(1) 1];
...
...
@@ -40,10 +41,11 @@ function make_axes(obj,varargin)
%% DONE TILL HERE!!! REST NEEDS FIXING!
% ASSIGN AXES TO POSITION RELATIVE TO PLAYGROUND AND INDEX
pos
=
[
0.1
+
(
iAx
/
20
)
0.3
0.3
0.3
];
%pos = [0.1+(iAx/20) 0.3 0.3 0.3];
cAx
=
pb_invidx
(
graphsz
,
iAx
);
% align axes and objects
h
(
cAx
)
=
axes
(
'Parent'
,
obj
(
1
)
.
parent
,
'
Outer
Position'
,
pos
);
h
(
cAx
)
=
axes
(
'Parent'
,
obj
(
1
)
.
parent
,
'Position'
,
pos
(
iAx
,:)
);
axis
square
% Set Grids
...
...
@@ -64,20 +66,54 @@ function make_axes(obj,varargin)
end
% Set labels
if
~
obj
(
1
)
.
labels
.
supx
;
xlabel
(
obj
(
Ax2Obj
)
.
labels
.
xlab
);
end
if
~
obj
(
1
)
.
labels
.
supy
;
ylabel
(
obj
(
Ax2Obj
)
.
labels
.
ylab
);
end
%
if ~obj(1).labels.supx; xlabel(obj(Ax2Obj).labels.xlab); end
%
if ~obj(1).labels.supy; ylabel(obj(Ax2Obj).labels.ylab); end
%% SHOULD I GO FOR THIS? MAYBE THIS COMPLICATES STUFF
% Make scientific notations on the axes.
h
(
cAx
)
.
YAxis
.
Exponent
=
length
(
num2str
(
max
(
abs
(
round
(
h
(
cAx
)
.
YLim
)))))
-
1
;
h
(
cAx
)
.
XAxis
.
Exponent
=
length
(
num2str
(
max
(
abs
(
round
(
h
(
cAx
)
.
XLim
)))))
-
1
;
end
end
diff
=
abs
(
obj
(
1
)
.
h_ax_labels
.
Position
(
2
)
-
h
(
end
)
.
OuterPosition
(
2
));
%% Checkout
% Store and update primary obj data
obj
(
1
)
.
h_ax_labels
.
Position
(
2
)
=
obj
(
1
)
.
h_ax_labels
.
Position
(
2
)
+
diff
;
obj
(
1
)
.
h_ax_labels
.
Position
(
4
)
=
obj
(
1
)
.
h_ax_labels
.
Position
(
4
)
-
(
2
*
diff
);
obj
(
1
)
.
h_ax_plot
.
handles
=
h
;
obj
(
1
)
.
h_ax_plot
.
sz
=
graphsz
;
end
function
pos
=
axis_pos
(
obj
,
sz
,
area
)
% Defines the positions of all graphic axes in a given graphic area
% Get sizes
rep
=
prod
(
sz
);
pos
=
zeros
(
rep
,
4
);
asz
=
obj
(
1
)
.
parent
.
Position
;
obj
(
1
)
.
h_ax_plot
.
handles
=
h
;
obj
(
1
)
.
h_ax_plot
.
sz
=
graphsz
;
% Find smallest ratio
ra
=
(
area
(
3
)
*
asz
(
3
))
/
(
area
(
4
)
*
asz
(
4
));
rs
=
sz
(
2
)/
sz
(
1
);
width
=
area
(
4
)/
sz
(
1
);
% get y length
if
ra
/
rs
<
1
;
width
=
area
(
3
)/
sz
(
2
);
end
% change to x length
width
=
width
*.
9
;
for
iAx
=
1
:
rep
% Get idx position
[
c
,
r
]
=
pb_mod
(
iAx
,
sz
(
2
));
if
c
==
0
;
c
=
sz
(
2
);
end
N
=
[
r
+
1
,
c
];
% Get normalized position
x
=
area
(
1
)/
2
+
(
N
(
2
)
-
1
)
*
width
;
y
=
(
sz
(
1
)
*
width
*
1.1
)/
2
+
0.5
-
N
(
1
)
*
width
;
pos
(
iAx
,:)
=
[
x
y
width
width
];
end
end
...
...
subtools/draft/@pb_draft/private/make_suplabel.m
View file @
1424b8fb
...
...
@@ -43,7 +43,7 @@ function make_suplabel(obj,varargin)
% Store and update primary obj data
obj
(
1
)
.
h_ax_labels
=
h
;
obj
(
1
)
.
h_ax_plot
.
playground
=
h
.
Position
;
obj
(
1
)
.
h_ax_plot
.
playground
=
[
h
.
Position
(
1
)
*
0.8
h
.
Position
(
2
)
h
.
OuterPosition
(
3
:
4
)]
;
end
...
...
subtools/draft/example_draft.m
View file @
1424b8fb
...
...
@@ -4,7 +4,7 @@
pb_clean
;
% Empty
load
(
'exD_saccade'
);
% load example data
cfn
=
0
;
% Initialize current figure number
run
=
1
;
% Set # of blocks to run
run
=
9
;
% Set # of blocks to run
%% Block 1:
% Make figure 1: Plot data
...
...
@@ -20,7 +20,7 @@ run = 1; % Set # of blocks to run
% d.plot_hline('type','mode');
%
% % Layout
% d.set_axcomp(Saccades.Subject);
%
%
d.set_axcomp(Saccades.Subject);
% d.set_title('Saccade Latencies');
% d.set_labels('x','Gaze Latency (ms)','y','Head Latency (ms)');
% d.set_grid;
...
...
subtools/draft/example_draft2.m
0 → 100644
View file @
1424b8fb
%% Initialize
% Prepare example_draft: clean and initialize.
pb_clean
;
% Empty
load
(
'exD_saccade'
);
% load example data
cfn
=
0
;
% Initialize current figure number
%% Block 1:
% Make figure 1: Plot data
% Build draft-objs
d
(
1
)
=
pb_draft
(
'x'
,
Saccades
.
GazeLatency
,
'y'
,
Saccades
.
HeadLatency
,
'color'
,
Saccades
.
Modality
);
d
(
2
)
=
pb_draft
(
'x'
,
Saccades
.
GazeLatency
,
'y'
,
Saccades
.
HeadLatency
,
'color'
,
Saccades
.
Modality
);
d
(
3
)
=
pb_draft
(
'x'
,
Saccades
.
GazeLatency
,
'y'
,
Saccades
.
HeadLatency
,
'color'
,
Saccades
.
Modality
);
% Figure Layout
d
.
set_title
(
'Saccade Latencies'
);
d
.
set_grid
;
d
.
set_legend
(
'Entries'
,{
'Audio'
,
'Visual'
,
'Audiovisual'
});
% Build
d
.
draft
;
utilities/housekeeping/pb_figure.m
0 → 100644
View file @
1424b8fb
function
h
=
pb_figure
(
n
,
varargin
)
% PB_FIGURE()
%
% PB_FIGURE() ...
%
% See also ...
% PBToolbox (2019): JJH: j.heckman@donders.ru.nl
if
nargin
==
0
g
=
groot
;
n
=
1
;
if
~
isempty
(
g
.
Children
);
n
=
g
.
Children
(
end
)
.
Number
+
1
;
end
end
MP
=
get
(
0
,
'MonitorPositions'
);
FigH
=
figure
(
n
);
if
size
(
MP
,
1
)
==
1
% Single monitor
set
(
figH
,
varargin
{:})
else
% Multiple monitors
% Catch creation of figure with disabled visibility:
indexVisible
=
find
(
strncmpi
(
varargin
(
1
:
2
:
end
),
'Vis'
,
3
));
if
~
isempty
(
indexVisible
)
paramVisible
=
varargin
(
indexVisible
(
end
)
+
1
);
else
paramVisible
=
get
(
0
,
'DefaultFigureVisible'
);
end
%
Shift
=
MP
(
1
,
1
:
2
);
set
(
FigH
,
varargin
{:},
'Visible'
,
'off'
);
set
(
FigH
,
'Units'
,
'pixels'
);
pos
=
get
(
FigH
,
'Position'
);
set
(
FigH
,
'Position'
,
[
pos
(
1
:
2
)
+
Shift
,
pos
(
3
:
4
)],
'Visible'
,
paramVisible
);
end
if
nargout
~=
0
;
h
=
FigH
;
end
end
% % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
% %
% Part of Programmeer Beer Toolbox (PBToolbox) %
% Written by: Jesse J. Heckman (2019) %
% %
% % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
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